Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015839994.1_cds_XP_016507469.1_20588
CDS Infomation

[gene=LOC107825154] [db_xref=GeneID:107825154] [protein=putative pumilio homolog 8, chloroplastic] [protein_id=XP_016507469.1] [location=join(135231..136525,136629..136791,137945..138108,139094..139349,140262..140369)] [gbkey=CDS]
Sequence

ATGTATAGAGGTGAAGAAAAGGGAAAAATGAAGGGTGCTGAAGAAATGCTGAGGATGATG
ATGATGAAGGAAAGCGTTTCATATTTGCATCAAAATCATCAATATGATCATCAAACGATG
ATTGGGTTTTCGCAGTCGGGTTCAAGTTCTTCGTTTTCTGGTACTGGGTTTGGTTTATAT
GGTGATAATTCAGTGGATTCTTGGAATGTATTTGATCATCAGAATATTAATCAAGGAGAA
GGAGGAGTAGATGATATTACTAATACTACTTCTGGTTGGTCTAACATGCTTTTTCAGGAA
CAGAATTTTGATAAGCATGTTGACATAGGTGATCTGTCTAAGAGATTTAATTATGGGATG
AGTATCAATGGAACAGGAAATTTTGGTAATGATTTTTTTGATTTTCAAAAGTCAGGAGAA
TTATTAGGTGGACAGAAAGATTATTTGTATGATTCAATGGGGTCTTTTTGTAGTACTAAC
AAACATCCTGTTAATCCTCTGTACAATGACCTCTGTTTTCAAAAAGAGCAAATTGATTAT
ACTAACTTGTGTAACATGAATAGGCCTAGTAGTAATGTGAGTCTTGGATGCTCAGAGCAG
TGTGGATTTAATGATGTTGGTGTTGATAGGAGTTTGCTTAGCTCATTACATGGCATAAAT
TCAGAATGTGATTGTTCCATTTTAAAGCAGCAAAGGGCTAAATCAATACCTATTACTAAC
ATAGTGAATGTGAATCACCCTCTTTCCCCATTGCCAAATTCAAGAGGCCACGAGAGTGAA
GACAGCTTCATTATTCAAGGGGAATGTTTAAAATATGCTTCTGAACACAGAGGTTTAAAG
GGTCACAAGAAAAAATCACGGAATGAGATTAAAATGGAGAGGTTGCAAGAGAAGAAACCA
GCAAGAAATAGCTTAATGCAGCATAATGGAGAATCTTGTCAAGTTGGTTTAAGGGACACT
GAATTCCAAGTAAGAGGATTTAGTAAAAATGGTTTGGCCTCAAGGGATGATGCTAGTCTT
ACGCGTTCGGAACAAAACTATGTGTATTTGGCAGCTAAAGATCAGCTGGGGTGTAGGTAT
TTACAGAGGATATTTGATGAAGGGACCTCAGATGATGTTCAGATAATATTCAATGGCATC
ATACATAATATCTTTGAGTTAATGAAGGATCCATTCGGGAACTATCTCGTGCAGAAATTA
TTGACTGTTTGTACTGATGAGCAGAGAATGCAGTTTGTGCTCGCGGTGACTGATAATCCA
GGAGAGCTTGTGAAAACATCTAGGACTACGCACGGGACCCGTGTTGTGCAAAAGTTAATT
GAGACAATGAAGACCAGGCTGGAAATTTCGTTAGTTATAAGGGCACTTCAACCTGGTATT
CTTAATCTCATGATGGATGTCAATGGAAATCATGTGGTTCAGCGTTGCTTGCATTGTTTA
AGCAAAGATCATAACAAGCTTATTTTTGATGTTGCGAGTAAACATTGTATTGATATTGCA
ACACATCGTTATGGATGCTGTGTGCTGAACAAATGCATCACTTATTCAACTGGGAAGCAA
CGTGAGAAGTTGCTTGTTGGGATTTGTTCTAATGGGCTTAAGCTTGCTCAAGATCCTTTT
GGGAATTATGTTGTTCAATTCATAATAGAGTTAAAGATAGCCTCTGCTGCAGCCATGTTG
CTCTCTCAGTTTGATGGCCATTATGTATACCTCTCAAGGCAAAAGTTTGGCAGTCATGTT
GTTGAAAAGTTCCTCAAGTGTGTTGAAGAAAGTAGGTCGAGAATCATCAATGAGTTAGTC
TCAGAGCCTCATTTTGATCAGTTGCTGCAAGATCCTTTCGCTAACTATGTGATTCAGTCT
GCACTTGGCGTTACTAAGGGATCCGTTCGAGCTTTGCTGCTTCAAGCTGTGAGGCCTCAC
ATGCTTCTCCTGCGCACAAGTCCATACTGCAAGAAAATCTTCTCTCGGCGACTACTAAAA
AAGTAA

Peptide Sequence

PEP ID

XP_016507469.1
PEP Infomation

PREDICTED: putative pumilio homolog 8, chloroplastic [Nicotiana tabacum]
Sequence

MYRGEEKGKMKGAEEMLRMMMMKESVSYLHQNHQYDHQTMIGFSQSGSSSSFSGTGFGLY
GDNSVDSWNVFDHQNINQGEGGVDDITNTTSGWSNMLFQEQNFDKHVDIGDLSKRFNYGM
SINGTGNFGNDFFDFQKSGELLGGQKDYLYDSMGSFCSTNKHPVNPLYNDLCFQKEQIDY
TNLCNMNRPSSNVSLGCSEQCGFNDVGVDRSLLSSLHGINSECDCSILKQQRAKSIPITN
IVNVNHPLSPLPNSRGHESEDSFIIQGECLKYASEHRGLKGHKKKSRNEIKMERLQEKKP
ARNSLMQHNGESCQVGLRDTEFQVRGFSKNGLASRDDASLTRSEQNYVYLAAKDQLGCRY
LQRIFDEGTSDDVQIIFNGIIHNIFELMKDPFGNYLVQKLLTVCTDEQRMQFVLAVTDNP
GELVKTSRTTHGTRVVQKLIETMKTRLEISLVIRALQPGILNLMMDVNGNHVVQRCLHCL
SKDHNKLIFDVASKHCIDIATHRYGCCVLNKCITYSTGKQREKLLVGICSNGLKLAQDPF
GNYVVQFIIELKIASAAAMLLSQFDGHYVYLSRQKFGSHVVEKFLKCVEESRSRIINELV
SEPHFDQLLQDPFANYVIQSALGVTKGSVRALLLQAVRPHMLLLRTSPYCKKIFSRRLLK
K

Transcript Sequence

Gene sequence data has not been registered.